Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015825890.1_cds_XP_016502480.1_16116
CDS Infomation

[gene=LOC107820671] [db_xref=GeneID:107820671] [protein=phosphatidylinositol/phosphatidylcholine transfer protein SFH11-like] [protein_id=XP_016502480.1] [location=join(5653..6003,6832..6950,7866..7961,9078..9334,10410..10630,11900..12355)] [gbkey=CDS]
Sequence

ATGGGAGACTTGCCATGTCCACCATATCCCAACAAAAGATTAGAGGCAAGGATACTTAGC
AAGAACAAGCTGCCAAAAATTTGTTTAGTTGCTTCTGCGACAAAGCACTTCTCGGAGAAG
ACTTTGAAATGTATAACCAAAGTGAAACAGAGTGTACAGACTAGTGGAGCTGCTGGTGAT
GTTGTTGTATTTTTGGCTACCACTGCTGCTCTAGAGATTGTGCGAAGGCTAAGCAAAGGT
AGATGTCCTTTTATTTGGCGTGGTTTGCAGGCTCTGCAAGTTTTATGTTATCCACCGTTT
AAGTGGATCCAGAAATGGGCTCCTTTGAAGGCATTGGTCAAACAGTTGCAGAAATTGTCT
AGGCCAATGCTATTGCTCTCAATTGCAACACTTTTCTCTGATCGGTCATCATCTACTGAA
GAAGCGACACCAAATGACTATCATGATTCTCGAGCATATCCACAAGCTAGCTCTCATGAT
GAAGTATTGGATGATGATTATCCTGAAAGATGGTTGCTAGAACTCCATAGGGAACTCAGG
GAGGAGGGTATTAGTGTACCTGAAAGGTTGAATGATGATGAGCTCCGACAATTTTATGCT
GCTGCAAATGGTGATTTTTCAAAGTTGCTTTCATCAGTTAAGAAGACCATTAAATGGAGG
CAGAGTTACACAATTCTTTCACCAGAAGAGCTCGAGGCTTGCTCACAGTTCATTTTTTGG
CATGGCCATGATGCCAATCAACGGCCTTGCCTCATCATTCGCCTTGGACTTGCTTGCTCC
AACCTGAAATCCAGGGACAGACTTCTCGTTGTAAAAGCAGTTGTTTCGCAGATTGAACAC
GGTATTTTGAGCTTGGTCGATGTGAGACATCCTCAAATTACTGTCTTGATGGACTGTGAA
GGACTCTCTCCACTTGGTTTTCCCATACACACAATGAGATCTTGTGCTATGCTCTTGCAA
GATCATTATCCTAATCGTCTAAGCTCTTTGATTGTAGTACGGCTCCCTCAAGTTGCCCAA
ATAATAATGCAGGCTTTCTTTAAGGTGCTTAAACCAGCCACGCGCCAAAAAGTGAGGATA
ATTGGGAGAAACCATCTAGAGTTTCTCTCCAAGAACCTCGATTCAATCCCTCCGTTTCTT
GGTGGAAGCTGCTCGTGCTCAAAATGCTCAGACGGGAGCAATGTGGAGGGTATATCTGAT
GAAGTCACGTTGGCAGAACCAACACCTGATCGTGTGGACAGATCTGATGAGGTCTCTCAG
ACAGAACCAACACCTGATCATGTGAATAAATCTGATGAGGTCACTTGGACAGAACCAGCA
CCTGATCATGTGAACAAAAGCCCCGAGCTTGATCATAATAATGGCTCCAACACAAATGGC
AACAGGGAAGAGCTGATAAAGACCCTCATCATTGGTATACTGATGGTGTGTATACTTATT
GCTGTGATTGTGGCAATGCATTATCCAGAAAGATTGCCTCTTTTGCATTCGCTTAGATAA

Peptide Sequence

PEP ID

XP_016502480.1
PEP Infomation

PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH11-like [Nicotiana tabacum]
Sequence

MGDLPCPPYPNKRLEARILSKNKLPKICLVASATKHFSEKTLKCITKVKQSVQTSGAAGD
VVVFLATTAALEIVRRLSKGRCPFIWRGLQALQVLCYPPFKWIQKWAPLKALVKQLQKLS
RPMLLLSIATLFSDRSSSTEEATPNDYHDSRAYPQASSHDEVLDDDYPERWLLELHRELR
EEGISVPERLNDDELRQFYAAANGDFSKLLSSVKKTIKWRQSYTILSPEELEACSQFIFW
HGHDANQRPCLIIRLGLACSNLKSRDRLLVVKAVVSQIEHGILSLVDVRHPQITVLMDCE
GLSPLGFPIHTMRSCAMLLQDHYPNRLSSLIVVRLPQVAQIIMQAFFKVLKPATRQKVRI
IGRNHLEFLSKNLDSIPPFLGGSCSCSKCSDGSNVEGISDEVTLAEPTPDRVDRSDEVSQ
TEPTPDHVNKSDEVTWTEPAPDHVNKSPELDHNNGSNTNGNREELIKTLIIGILMVCILI
AVIVAMHYPERLPLLHSLR

Transcript Sequence

Gene sequence data has not been registered.